PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0515s0031.5.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 624aa MW: 72559.9 Da PI: 6.9322

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0515s0031.5.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.5	9.5e-23	14	101	5	90
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++A+++GFs+rk++s++s++ g +++r++vC+++g+++++kk+++++ r+r++ r+gC+ak+ ++ke ++w+v+++++ HnHel Kaladp0515s0031.5.p 14 NFARKTGFSIRKARSTESHNLG-VYRRDYVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKMYLTKEIvdgVAQWYVSQFSNIHNHELL 101 59**************7777.**************************************998766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MKEMITQLLA HSFNFARKTG FSIRKARSTE SHNLGVYRRD YVCYRSGFNQ PRKKANVEHP 60 RERKSVRCGC DAKMYLTKEI VDGVAQWYVS QFSNIHNHEL LEDDQVRLLP AYRKIQEADQ 120 ERILLLSKAG FPVNRIVKVL ELEKGVQPGQ LPFIEKDVRN FVRTCKKTIQ ENDTLLTEKR 180 ENDTLEFLEA CKAMAEKDFE FVYDYSTDEN GKVENIAWSY GQSVCAYTMF GDVVFFDTAY 240 HSITYGLLLG TWFGMDNHGK PILLGCVLLQ DETSRSFAWA FQSFHRFMRG RQPQTIVTDM 300 DTAIIHAVAN ELPNTKHVIC LWHIISKLSS WFTVPLGLHY GDFRSEFEAT CFLERIEEFE 360 HQWNHLVTQY ELGSDKHMVL LYTYREYWPF CYINNYFLAR MVTKEFLKSM STFLKKILSS 420 QSCLQGFFEE IATAVSIDYQ KNDDIQYTYI KTCMPVEEHA RSILTPYAFS VLQNELVLSM 480 QYEITDMPDG SYHLRHYKGL DKALVIRAEP IQCSCKAFDY SGILCRHCLR ILVLKNCFQL 540 PETYFLPRWR SDSNFYSVDN QNQQTGTDER VQAFHTLSTS LLSESIMTRE RFNYVRRELS 600 GLLENVRNMP AIIEAAVLGS LAG*

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MKEMITQLLA HSFNFARKTG FSIRKARSTE SHNLGVYRRD YVCYRSGFNQ PRKKANVEHP  60
RERKSVRCGC DAKMYLTKEI VDGVAQWYVS QFSNIHNHEL LEDDQVRLLP AYRKIQEADQ  120
ERILLLSKAG FPVNRIVKVL ELEKGVQPGQ LPFIEKDVRN FVRTCKKTIQ ENDTLLTEKR  180
ENDTLEFLEA CKAMAEKDFE FVYDYSTDEN GKVENIAWSY GQSVCAYTMF GDVVFFDTAY  240
HSITYGLLLG TWFGMDNHGK PILLGCVLLQ DETSRSFAWA FQSFHRFMRG RQPQTIVTDM  300
DTAIIHAVAN ELPNTKHVIC LWHIISKLSS WFTVPLGLHY GDFRSEFEAT CFLERIEEFE  360
HQWNHLVTQY ELGSDKHMVL LYTYREYWPF CYINNYFLAR MVTKEFLKSM STFLKKILSS  420
QSCLQGFFEE IATAVSIDYQ KNDDIQYTYI KTCMPVEEHA RSILTPYAFS VLQNELVLSM  480
QYEITDMPDG SYHLRHYKGL DKALVIRAEP IQCSCKAFDY SGILCRHCLR ILVLKNCFQL  540
PETYFLPRWR SDSNFYSVDN QNQQTGTDER VQAFHTLSTS LLSESIMTRE RFNYVRRELS  600
GLLENVRNMP AIIEAAVLGS LAG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein