PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0550s0040.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 252aa    MW: 27066.2 Da    PI: 6.6887
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0550s0040.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016151173123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C+ Cg  Fs+   L  H+r+H
  Kaladp0550s0040.1.p 151 HQCSVCGSEFSSGQALGGHMRRH 173
                          79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MELPEHEATA VAAPVHQEPL TLSIDRGNRA NRPSRVSSDE EERRICDSVV TEEEQDLANC  60
LILLARAELV RGGKRKLADL GGCHECKACN KTFPSFQGLY GHRAGHGKPR SEINDCDAEK  120
QLSTSLQLST TNSRNGNVSS VKASALSNRV HQCSVCGSEF SSGQALGGHM RRHRAVPAPV  180
RSPCTGVSSP ATSMGEVKTL SVFSLDLNLP APEESEIDHQ RGLEDEQNAA CFQQNTPVFS  240
AHAHALLGCH H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.13e-33C2H2 family protein