PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0574s0002.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TCP
Protein Properties Length: 346aa    MW: 38323.4 Da    PI: 8.1135
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0574s0002.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP905.2e-2852136286
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 
                           g+kdrhsk++T +g+RdRR+Rls+++a++++dLq++LG+ ++sk i+WL+   k+ i++l+ ++ ++  +  +  ++s +++n++
  Kaladp0574s0002.3.p  52 SGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVIDWLIDSTKEDIDKLPPLQLPQG-SLgQFLQQSIMSHNDQ 136
                          579*************************************************************44444.2222222222222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MTSSESRELV PAAKQEESAD LAYNSKLGNA KTSSRQWSGF RNPRIVRVSQ SSGGKDRHSK  60
VCTVRGLRDR RIRLSVPTAI QLYDLQERLG LSQPSKVIDW LIDSTKEDID KLPPLQLPQG  120
SLGQFLQQSI MSHNDQIAAA PNRNSSFPLL FDANSGMFAC KDNWININNN AHMQDPDMVG  180
ERSKYWDYLD AASKAKSKEI ERDNELINQA EKERWMETNS QHGNHFQGLK GYNNISQASA  240
QNFFPVAGGS PLLGSNGTSV DNNPYNQSWD PSSTPSLAQL GSRGISSMHQ AHNVQNNCNL  300
LSSSSSAFDP RQINSLFHLL TSTSPIKSFQ QNSANPKFHS QDVDN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.15e-40TCP family protein