PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0574s0002.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 313aa MW: 34721.4 Da PI: 8.4678

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0574s0002.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	87.9	2.3e-27	52	160	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................... 65 g+kdrhsk++T +g+RdRR+Rls+++a++++dLq++LG+ ++sk i+WL+ k+ i++l+ + Kaladp0574s0002.4.p 52 SGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVIDWLIDSTKEDIDKLPPLqlpqgslgmfackdnwininnnahmq 141 579*************************************************************66665555555544444444333333 PP TCP 66 ssssaseceaesssssasnsssg................k 89 + + + Kaladp0574s0002.4.p 142 D---------------------PdmvgerskywdyldaaS 160 0.....................133333333333332110 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MTSSESRELV PAAKQEESAD LAYNSKLGNA KTSSRQWSGF RNPRIVRVSQ SSGGKDRHSK 60 VCTVRGLRDR RIRLSVPTAI QLYDLQERLG LSQPSKVIDW LIDSTKEDID KLPPLQLPQG 120 SLGMFACKDN WININNNAHM QDPDMVGERS KYWDYLDAAS KAKSKEIERD NELINQAEKE 180 RWMETNSQHG NHFQGLKGYN NISQASAQNF FPVAGGSPLL GSNGTSVDNN PYNQSWDPSS 240 TPSLAQLGSR GISSMHQAHN VQNNCNLLSS SSSAFDPRQI NSLFHLLTST SPIKSFQQNS 300 ANPKFHSQDV DN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-40	TCP family protein