PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0574s0002.8.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 382aa MW: 42057.6 Da PI: 7.637

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0574s0002.8.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	89.7	6.3e-28	52	167	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesss 79 g+kdrhsk++T +g+RdRR+Rls+++a++++dLq++LG+ ++sk i+WL+ k+ i++l+ + + s ++++++ Kaladp0574s0002.8.p 52 SGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQERLGLSQPSKVIDWLIDSTKEDIDKLPPLqlpqgslgqflqQ----SIMSHNDQI 137 579*************************************************************5544444422220....222333333 PP TCP 80 ssasnsssg....................k 89 +a n +s+ Kaladp0574s0002.8.p 138 AAAPNRNSSfpllfdansgmfackdnwinI 167 333333333566666555555555555541 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MTSSESRELV PAAKQEESAD LAYNSKLGNA KTSSRQWSGF RNPRIVRVSQ SSGGKDRHSK 60 VCTVRGLRDR RIRLSVPTAI QLYDLQERLG LSQPSKVIDW LIDSTKEDID KLPPLQLPQG 120 SLGQFLQQSI MSHNDQIAAA PNRNSSFPLL FDANSGMFAC KDNWININNN AHMQDPDMVG 180 ERSKYWDYLD AASKAKSKEI ERDNELINQA EKERWMETNS QHGNHFQGLK GYNNISQASA 240 QNFFPVAGGS PLLGSNGTSV DNNPYNQSWD PSSTPSLAQL GSRGISSMHQ AHNVQNNCNL 300 LSSSSSAFGA LPSAGPQLFF CPAPNSSFFP VTTYAPYTTT SLEADPRQIN SLFHLLTSTS 360 PIKSFQQNSA NPKFHSQDVD N*

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MTSSESRELV PAAKQEESAD LAYNSKLGNA KTSSRQWSGF RNPRIVRVSQ SSGGKDRHSK  60
VCTVRGLRDR RIRLSVPTAI QLYDLQERLG LSQPSKVIDW LIDSTKEDID KLPPLQLPQG  120
SLGQFLQQSI MSHNDQIAAA PNRNSSFPLL FDANSGMFAC KDNWININNN AHMQDPDMVG  180
ERSKYWDYLD AASKAKSKEI ERDNELINQA EKERWMETNS QHGNHFQGLK GYNNISQASA  240
QNFFPVAGGS PLLGSNGTSV DNNPYNQSWD PSSTPSLAQL GSRGISSMHQ AHNVQNNCNL  300
LSSSSSAFGA LPSAGPQLFF CPAPNSSFFP VTTYAPYTTT SLEADPRQIN SLFHLLTSTS  360
PIKSFQQNSA NPKFHSQDVD N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	9e-40	TCP family protein