PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0574s0015.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 412aa MW: 44913.2 Da PI: 9.3024

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0574s0015.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1.1e-15	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G W+ I ++g ++t+ q++s+ qk+ Kaladp0574s0015.1.p 58 REKWTEEEHQKFIEALKLFGRA-WRQIEDYIG-TKTAVQIRSHAQKF 102 789***************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MKVDLAMATV QKPTSGIGNS ITSIATGSNS HSVSCETNLD GSGVALKVRK PYTISKQREK 60 WTEEEHQKFI EALKLFGRAW RQIEDYIGTK TAVQIRSHAQ KFFSKVTKEG ANSVEASNEA 120 IKIPPPRPKR KPSHPYPRKL AEAPNKSCPN IQENGTSSNL KTMERKAQSP TSVLSPEGSH 180 TSTPHLKGQG SGSVTPTSSG SNLSHVLDMD RLTKNNSTLE EKERDISLTL TLSVPSLNAS 240 TIMHAGKEFK GAELTNDDGV YLEAETMFVG GGDTPLTTIK LFGHTVVVAK PLELSAGMEN 300 VVSHTATRDL LMFSDLHLNP LVSKGSHAYV SSPGLGLGLD GQLVPTIKWC RFSTIFNLSI 360 KLLISSPEYM IRWEPSSMIH VYILMTFSQT NRACTFFTDR TCLVALDVIP R*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MKVDLAMATV QKPTSGIGNS ITSIATGSNS HSVSCETNLD GSGVALKVRK PYTISKQREK  60
WTEEEHQKFI EALKLFGRAW RQIEDYIGTK TAVQIRSHAQ KFFSKVTKEG ANSVEASNEA  120
IKIPPPRPKR KPSHPYPRKL AEAPNKSCPN IQENGTSSNL KTMERKAQSP TSVLSPEGSH  180
TSTPHLKGQG SGSVTPTSSG SNLSHVLDMD RLTKNNSTLE EKERDISLTL TLSVPSLNAS  240
TIMHAGKEFK GAELTNDDGV YLEAETMFVG GGDTPLTTIK LFGHTVVVAK PLELSAGMEN  300
VVSHTATRDL LMFSDLHLNP LVSKGSHAYV SSPGLGLGLD GQLVPTIKWC RFSTIFNLSI  360
KLLISSPEYM IRWEPSSMIH VYILMTFSQT NRACTFFTDR TCLVALDVIP R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	1e-35	MYB_related family protein