PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0577s0020.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 236aa    MW: 26010.2 Da    PI: 6.5234
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0577s0020.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.31e-142468147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         r +WT eE++++++a +++  + Wk+I   +g ++t  q++s+ qky
  Kaladp0577s0020.1.p 24 RENWTDEEHDKFLEALQLFDRD-WKKIEDFVG-TKTVIQIRSHAQKY 68
                         789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MASSTPTDAL EKKVRKPYTI TKSRENWTDE EHDKFLEALQ LFDRDWKKIE DFVGTKTVIQ  60
IRSHAQKYFL KVQKNGTLAH VPPPRPKRKS AHPYPQKASK NVLVPLQAPM VYSLSFNNPP  120
SGYSLWDESP MLINSGSSGI VPSQDEFTGL SEVEADVGPK GVTTMIGSST AGGSDSSRSF  180
PSSEVPDQDK QAPVVHGIPD FAEVYNFIGS VFDPDTKGHV QKLKEMDPIN FETVS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-107MYB_related family protein