PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0606s0021.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 230aa    MW: 26331.3 Da    PI: 6.0828
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0606s0021.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.24e-18169215148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          +g WT eEd llv++v ++G + W+ Ia+ ++ gR +kqc++rw+++l
  Kaladp0606s0021.1.p 169 KGQWTHEEDRLLVQLVDRYGIRKWSIIAQLLP-GRIGKQCRERWHNHL 215
                          799*****************************.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDQFGAAKYE EAHPTHQMFV SDTLSKLPTT DGFPFEAVLP LPDNNFLDDN HQPNHQNFNA  60
WASVDKSFDL YQGSYLDPFD TYALESHQTG LSCGMLDRPA NKFYYDYNED IKPLNYVVPD  120
EFSCVTTNVD FTRYSADSNT AQESMIRVTS SVSSARKGPC KGKQSNVIKG QWTHEEDRLL  180
VQLVDRYGIR KWSIIAQLLP GRIGKQCRER WHNHLRPNIK VEFSSIYTF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.17e-37MYB family protein