PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0607s0011.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 258aa    MW: 29524.5 Da    PI: 8.491
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0607s0011.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.11.1e-1699153256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++keq   Le+ F+ + ++ ++++e LA++l+L  rqV vWFqNrRa+ k
  Kaladp0607s0011.1.p  99 RKKLRLNKEQSALLEDSFKLQTTLHQKQKEALARQLNLLPRQVEVWFQNRRARTK 153
                          5777899**********************************************98 PP
2HD-ZIP_I/II112.52.7e-3699188190
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl+keq++lLE+sF+ +++L++++K++lar+L+l prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL+ke ++L+++
  Kaladp0607s0011.1.p  99 RKKLRLNKEQSALLEDSFKLQTTLHQKQKEALARQLNLLPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCERLTDENDRLRKELRALKQA 188
                          69*************************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MSPPLDGRGL LLGLALRTAP VPPLGLSLSS THDHHIISYD HQPSLTLSLL FPTNKLDDYD  60
DDQISSLSNS VNSVKRERAY GVANNINDAY EDVSNNIIRK KLRLNKEQSA LLEDSFKLQT  120
TLHQKQKEAL ARQLNLLPRQ VEVWFQNRRA RTKLKQTEVD CEFLKRCCER LTDENDRLRK  180
ELRALKQASQ HQPFHKTARL SMCPSCQSLT DHLRSNNDIS HPIINFLTSS EKHMLFNDPF  240
VTEPAEQLKP YHSFSVM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148156RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.15e-57HD-ZIP family protein