PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0630s0072.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 192aa    MW: 20208.2 Da    PI: 9.8856
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0630s0072.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.78.2e-43221221100
               DUF260   1 aCaaCkvlrrkCakd.CvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                          +CaaCk+lrr+C+kd C++apyfpae+p kfa vh++FGasnv k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i++lqqq++ 
  Kaladp0630s0072.1.p  22 PCAACKLLRRRCSKDeCAFAPYFPAEDPVKFATVHRVFGASNVNKMLQDLPAQHRGDAVSSLVYEANARVRDPVYGCVGAISALQQQIHV 111
                          7***********9977************************************************************************** PP

               DUF260  90 lkaelallkee 100
                          l+a+lal+++e
  Kaladp0630s0072.1.p 112 LQAQLALTQAE 122
                          ******99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MKQERSAAAP LKKGVPAVVA TPCAACKLLR RRCSKDECAF APYFPAEDPV KFATVHRVFG  60
ASNVNKMLQD LPAQHRGDAV SSLVYEANAR VRDPVYGCVG AISALQQQIH VLQAQLALTQ  120
AEVLHLRSLS ASQAAAALRK TGDVITSPTA AVHHPHGSAL VPSSTSSLPA SKLAASDTAK  180
SSFLAADRSW W*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16530.12e-50LBD family protein