PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0667s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 142aa    MW: 16252.9 Da    PI: 5.5485
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0667s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.27.9e-132371148
                         HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         l+++++k+lG++ W++Ia +++ gRt++++k++w+ +l
  Kaladp0667s0002.1.p  2 LIKRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNLHL 37
                         7899********.*********.***********9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
DLIKRLHKLL GNRWSLIAGR LPGRTDNEIK NYWNLHLKKR VLGETETNNI PSKHKTSRTS  60
YYEKEPTTSG NNSHECHAGN PNANQIDNEC QAAGNLNANQ INEVDNCFDW SPHISDCSEW  120
VNRLLDLDVE QWLQEDMDIL N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-20MYB family protein