PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0674s0011.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 208aa    MW: 23597.1 Da    PI: 10.1099
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0674s0011.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.21.4e-253686151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krien +nrq+tfskRr gilKKA+ELSvLC+aev ++++ss+g+ y ++s
  Kaladp0674s0011.1.p 36 KRIENATNRQITFSKRRYGILKKAFELSVLCEAEVVLLVLSSSGHSYNFAS 86
                         79**********************************************986 PP
2K-box75.12e-2511119912100
                K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                          +++e ++ e++ +k++i++L+ +q+h+ Ged++ L l eL+qLe++++++++++RskK ++l e+i+ l++k ++lqeen++L+ kl+e
  Kaladp0674s0011.1.p 111 NTTEFWRCEIEEMKRRIDSLEASQKHFAGEDITVLGLGELKQLERKVKTGVERVRSKKRRILSEHISSLKQKHRALQEENTRLQIKLDE 199
                          56899*******************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MAGNDLICNS SCLACKLAKL ASTSSDKMGR GKVELKRIEN ATNRQITFSK RRYGILKKAF  60
ELSVLCEAEV VLLVLSSSGH SYNFASHNVD RTIARYRNDV GLPQPANQLL NTTEFWRCEI  120
EEMKRRIDSL EASQKHFAGE DITVLGLGEL KQLERKVKTG VERVRSKKRR ILSEHISSLK  180
QKHRALQEEN TRLQIKLDEY GEALRHN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.18e-33MIKC_MADS family protein