PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0674s0135.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 326aa    MW: 36181.6 Da    PI: 4.531
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0674s0135.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.4e-1988140456
                          -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++++ +q++ Le+ Fe ++++  +++ +LAk++gL+ rqV +WFqNrRa++k
  Kaladp0674s0135.1.p  88 KRRLSVDQVQFLERSFEAENKLEPDRKIQLAKEVGLQPRQVAIWFQNRRARWK 140
                          568999**********************************************9 PP
2HD-ZIP_I/II129.21.7e-4187176291
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          kkrrls +qv++LE+sFe+e+kLep+rK +la+e+glqprqva+WFqnrRAR+kt+q+Ekdy+aL+++y++lk+  ++L +e+e+L++e+
  Kaladp0674s0135.1.p  87 KKRRLSVDQVQFLERSFEAENKLEPDRKIQLAKEVGLQPRQVAIWFQNRRARWKTRQMEKDYDALRASYNSLKSGYDALVQENENLKAEV 176
                          9**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGTGGGRVFM TGNLTGCSES MTPASNPPKA ALFLAGPSRF LGSGSAMMSF EDVNGSKGRG  60
ARSFFTAFDQ DDNGDEDYEE YLNQGGKKRR LSVDQVQFLE RSFEAENKLE PDRKIQLAKE  120
VGLQPRQVAI WFQNRRARWK TRQMEKDYDA LRASYNSLKS GYDALVQENE NLKAEVGTLS  180
EKLASKMNPL QNAELSETSK HSAALPDNPV SNSASEAEDS EFPLAERKPL DDFTSAKSDV  240
FQSDSPRYTD GVYSPRLEHV DSSYMLEPDN NSDLSEDDSL PKAYLPSSLY MLPLEHHDYT  300
DPSAATSSTF GSAHEDHQPF WSWSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.11e-43HD-ZIP family protein