PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0674s0155.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 395aa MW: 42660 Da PI: 7.0683

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0674s0155.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132	5.7e-41	87	194	2	107
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgka 90 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s +++ Kaladp0674s0155.1.p 87 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSVPSQ 176 789******************************************************************999888999999998888855 PP TCP 91 aksaa.kskksqksaasa 107 +s+ +++++ +s++ + Kaladp0674s0155.1.p 177 LRSSYfNPNFTVSSSQRN 194 555555555555555543 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MDGSSSGGSE DHQQQQHHHN YHHLQQQQFH LIHRPNFPFQ LLEKKEDSEQ QQHSESNYQA 60 QQQQKIVLTP SSSDQARAAS EAPKKAPPKR TSTKDRHTKV DGRGRRIRMP ALCAARVFQL 120 TRELGHKSDG ETIEWLLQQA EPAVIAATGT GTIPANFTSL NISLRSSGST MSVPSQLRSS 180 YFNPNFTVSS SQRNRSLFSG LGLSTGTSSS VLDFPVGIPA EKPPDSPLEM SPEEQEGAER 240 KRRAVEDDSM PPSPPPQMGG ASNNNSNYFL QSTSAGVIPA SHGQIPANIW MVANSTNPVM 300 AGHHHDNPIW TFPQMNPSSM YRGAPIPSGL HFMNFPLLPG QQMGALSGHG LPDSSSHLNM 360 LAALSNQYRS FGGSGGGSGG SDEPPPQGGD DHNQ*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MDGSSSGGSE DHQQQQHHHN YHHLQQQQFH LIHRPNFPFQ LLEKKEDSEQ QQHSESNYQA  60
QQQQKIVLTP SSSDQARAAS EAPKKAPPKR TSTKDRHTKV DGRGRRIRMP ALCAARVFQL  120
TRELGHKSDG ETIEWLLQQA EPAVIAATGT GTIPANFTSL NISLRSSGST MSVPSQLRSS  180
YFNPNFTVSS SQRNRSLFSG LGLSTGTSSS VLDFPVGIPA EKPPDSPLEM SPEEQEGAER  240
KRRAVEDDSM PPSPPPQMGG ASNNNSNYFL QSTSAGVIPA SHGQIPANIW MVANSTNPVM  300
AGHHHDNPIW TFPQMNPSSM YRGAPIPSGL HFMNFPLLPG QQMGALSGHG LPDSSSHLNM  360
LAALSNQYRS FGGSGGGSGG SDEPPPQGGD DHNQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	9e-52	TCP family protein