PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0733s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 283aa    MW: 31308 Da    PI: 9.3851
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0733s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.2e-12556147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                         +++WT+eE+e l+ +++++G g Wk I           +Rt  ++k++w+++
  Kaladp0733s0001.1.p  5 KLKWTAEEEEALLSGIARHGAGKWKNILTDPEfapvfSKRTNIDLKDKWRNL 56
                         689****************************9*****88***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGNPKLKWTA EEEEALLSGI ARHGAGKWKN ILTDPEFAPV FSKRTNIDLK DKWRNLTVSS  60
TGHHGMKDKS RIPKLKSLMA STSSNAQRSD SLAIIPHEAP LDVVMEDAPT GTQEPKNAPK  120
YNEMIFEAIS AAKDPNGLDI SAIVTFIVKK LEVPPNFRRL LSSKLRRLVT QGKLDKVQNS  180
YVIKKDTLAL PESKTPPVLA HRETWPQQAR TNGHAIVNTV MEEASISAAY KIADAENKSF  240
LASEAIKESE RVTKMCEDAE CFLQIAREIH ERCSQGKIVL LA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.18e-79MYB_related family protein