PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0778s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 221aa    MW: 25213.7 Da    PI: 7.9749
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0778s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.12.7e-154993147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         rg ++ +Ed+ll +++k+lG++  ++Ia +++ gRt++++k++w+k+
  Kaladp0778s0001.1.p 49 RGEFSLDEDDLLMRLHKLLGNR-RSLIAGRLP-GRTANDVKNHWNKH 93
                         899*******************.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MATDDDGARR YGVRKGAWRL NRCRKSCSLR WLNLLYIILG NYPKPYIKRG EFSLDEDDLL  60
MRLHKLLGNR RSLIAGRLPG RTANDVKNHW NKHFRKKTAS GQRFSTDIGK SIIITPTTST  120
AASKEGHDHM TSFDLFSTKE DVLEQMQCWK SLLDDQVSDQ EVAAVSSGSC SVEAQKPENG  180
LTELSFDIEM WDFLDDEWLA VTTRKKMWIA MAFDLSLFDL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-30MYB family protein