PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0808s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 346aa MW: 38784.1 Da PI: 6.3471

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0808s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lvd +++ G g+W++ ++ g++R++k+c++rw +yl Kaladp0808s0009.1.p 15 KGPWTPEEDEKLVDFINKNGHGSWRSLPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	53.8	4.5e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+ l+++++ lG++ W++Ia +++ gRt++++k++w+++l Kaladp0808s0009.1.p 68 RGKFSDEEERLIIHLHSVLGNK-WSRIATHLP-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRSPISFED DGLKKGPWTP EEDEKLVDFI NKNGHGSWRS LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSDEEERLII HLHSVLGNKW SRIATHLPGR TDNEIKNFWN THLRRKLLQM 120 GIDPTTHKPR TDYNNLLMNL TQLLATPNLA NLMSNSNNTN PWDNLNALRL QADAAAQLAK 180 AQLLQNLIQA MSIPNTQNTS FGTSQDYTSL QSLLHSNSVS YDTSNALSSN QFVNPSETPL 240 THQVSDEFQG LANSWAAENC GLSTTNNSSY YQVDRDQKSS LPALVSVSTD CTSANQIEIA 300 KEDHNISSGY MFDSFSPTGS YFQSWAELLD DEAVHNSFIK DFLLQ*

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRSPISFED DGLKKGPWTP EEDEKLVDFI NKNGHGSWRS LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSDEEERLII HLHSVLGNKW SRIATHLPGR TDNEIKNFWN THLRRKLLQM  120
GIDPTTHKPR TDYNNLLMNL TQLLATPNLA NLMSNSNNTN PWDNLNALRL QADAAAQLAK  180
AQLLQNLIQA MSIPNTQNTS FGTSQDYTSL QSLLHSNSVS YDTSNALSSN QFVNPSETPL  240
THQVSDEFQG LANSWAAENC GLSTTNNSSY YQVDRDQKSS LPALVSVSTD CTSANQIEIA  300
KEDHNISSGY MFDSFSPTGS YFQSWAELLD DEAVHNSFIK DFLLQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-82	MYB family protein