PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0809s0077.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 358aa MW: 40384.9 Da PI: 6.3484

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0809s0077.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.5e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+d+++++G+g +W + ++++g+ R++k+c++rw++yl Kaladp0809s0077.1.p 14 RGPWSPEEDAKLKDYIEKHGTGgNWIALPHKIGLQRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	37.3	6.3e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0809s0077.1.p 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MGRAPCCDKD SVKRGPWSPE EDAKLKDYIE KHGTGGNWIA LPHKIGLQRC GKSCRLRWLN 60 YLRPNIRHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR 120 HKQSSISSRL IPSTHSKDPN DAQEDPQQHA LSNSALERLQ LHLQLQSLQN PTSCYNNNPT 180 LWPRLHPLQE KMIQQNLLFI NQNETLIPST VVVSSQQQAV GHENVSDYSF YKPQQLDATY 240 TKLMTSSSEA VSDEYFGSIS SSTVVPKLDA GAADLNPKTF QDEYESFLSS DKMAELVSQV 300 DEFDYFKEAD SSKDQSSSFI WGSSNEFDSK SPTSTSWNTS SRLPCDHQMF QDFTFGL*

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MGRAPCCDKD SVKRGPWSPE EDAKLKDYIE KHGTGGNWIA LPHKIGLQRC GKSCRLRWLN  60
YLRPNIRHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR  120
HKQSSISSRL IPSTHSKDPN DAQEDPQQHA LSNSALERLQ LHLQLQSLQN PTSCYNNNPT  180
LWPRLHPLQE KMIQQNLLFI NQNETLIPST VVVSSQQQAV GHENVSDYSF YKPQQLDATY  240
TKLMTSSSEA VSDEYFGSIS SSTVVPKLDA GAADLNPKTF QDEYESFLSS DKMAELVSQV  300
DEFDYFKEAD SSKDQSSSFI WGSSNEFDSK SPTSTSWNTS SRLPCDHQMF QDFTFGL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-91	MYB family protein