PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0822s0017.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NF-X1

Protein Properties

Length: 1123aa MW: 122199 Da PI: 8.1499

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0822s0017.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	23.1	1.5e-07	388	405	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C+++CH+GpCp+C Kaladp0822s0017.1.p 388 CGNHFCMEICHPGPCPEC 405 ****************** PP
2	zf-NF-X1	19.4	2.3e-06	446	463	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C+++CH+G+C pC Kaladp0822s0017.1.p 446 CGIHLCKEKCHLGNCAPC 463 ****************** PP
3	zf-NF-X1	17.5	9.1e-06	652	667	1	16
zf-NF-X1 1 CGkHkCqklCHeGpCp 16 CG+H C ++CH+ C+ Kaladp0822s0017.1.p 652 CGMHACARTCHPSSCD 667 ***************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1123 aa Download sequence
MSSQVRNDRR RHPTQNSSRQ EWIRRGSVIA TVVNTTQPSA APVVLNPSQA SAPPASLDRI 60 SRSRSSSGGN VGDPSYRSTP RPDNRSSGQF ATRSSKGRPL NQRRDRDRAR ERENRDSGRT 120 ETDRENGRVD TEEVKDASLP LLVQELQEKL AKGSVECMIC YDMVRRSAPI WSCSSCYSIF 180 HLNCIRKWAR APTSVDLIAE KNQGDNWRCP GCQSVQLTTP KEIRYECFCR KRVDPPSDLY 240 LTPHSCGESC GKPFEKEAPV AGNSKDYLCP HVCVLQCHPG PCPPCKAFAP PCLCPCGKKM 300 ITTRCSDRRS VLTCGQRCDR LLDCWRHRCE KVCHVGPCDS CDSMIAASCF CKKRVEVLRC 360 GEMTVKGEVK AEDGVFSCTA SCGKKLGCGN HFCMEICHPG PCPECDLLPS RIKTCCCGKT 420 NLLEQRDSCM DPVPTCQQVC GKQLPCGIHL CKEKCHLGNC APCMTRVTQK CRCGSTSRTV 480 ECFKTTSAEE IFTCDKPCGR KKNCGRHRCS ERCCPLSNSS SNHLVDWDPH FCSMVCGKKL 540 RCGQHSCEAH CHSGYCAPCL ETIFTDLTCA CGRTSLPPPM PCGTPPPSCQ LPCLVPQPCG 600 HPCSHSCHFG DCPPCSVPVS KECVGSHVIL RNIPCGSKDI RCNKLCGKTR QCGMHACART 660 CHPSSCDAPS GSGTSSRASC GQMCGAPRRD CRHTCIAPCH PSDSCPDVRC NFPVTITCSC 720 GRITANVPCD AGGSTSGFSG DFLYEASILQ KWPARLQPVE SNGTKIPLGQ RKLTCDDECA 780 KLERKRVLAD AFDITPPNLE ALHLGENAAL SELLSDLFRR DAKWVMSVEE RCKFLVLGKS 840 QGAASNMKVH VFCPMPKEKR DALRVIAERW KLAINTAGWE PKRFVVVHVT SRSKAPSRTL 900 GVKGSVSSNI LHPPVFDPLI DMDPRLVVSL LDLPRDADIS ALVLRFGGEC ELVWHNDKNA 960 LAVFHDPARA ATAMRRLDHG SVYHGAVTIQ SVGASPASSG ANPWGVGPKS NPWKKATLEE 1020 PCWGEEKEEN SWGGADGSSS STAAGGAKSA WQKKEDPIPS SINRWSVLGS EVGHSSSVVS 1080 VSAKQNGMES HSKSMMPAGQ LGGEPSGANA SEAVDDWEKA YE*

Sequence ? help Back to Top

Protein Sequence Length: 1123 aa Download sequence

MSSQVRNDRR RHPTQNSSRQ EWIRRGSVIA TVVNTTQPSA APVVLNPSQA SAPPASLDRI  60
SRSRSSSGGN VGDPSYRSTP RPDNRSSGQF ATRSSKGRPL NQRRDRDRAR ERENRDSGRT  120
ETDRENGRVD TEEVKDASLP LLVQELQEKL AKGSVECMIC YDMVRRSAPI WSCSSCYSIF  180
HLNCIRKWAR APTSVDLIAE KNQGDNWRCP GCQSVQLTTP KEIRYECFCR KRVDPPSDLY  240
LTPHSCGESC GKPFEKEAPV AGNSKDYLCP HVCVLQCHPG PCPPCKAFAP PCLCPCGKKM  300
ITTRCSDRRS VLTCGQRCDR LLDCWRHRCE KVCHVGPCDS CDSMIAASCF CKKRVEVLRC  360
GEMTVKGEVK AEDGVFSCTA SCGKKLGCGN HFCMEICHPG PCPECDLLPS RIKTCCCGKT  420
NLLEQRDSCM DPVPTCQQVC GKQLPCGIHL CKEKCHLGNC APCMTRVTQK CRCGSTSRTV  480
ECFKTTSAEE IFTCDKPCGR KKNCGRHRCS ERCCPLSNSS SNHLVDWDPH FCSMVCGKKL  540
RCGQHSCEAH CHSGYCAPCL ETIFTDLTCA CGRTSLPPPM PCGTPPPSCQ LPCLVPQPCG  600
HPCSHSCHFG DCPPCSVPVS KECVGSHVIL RNIPCGSKDI RCNKLCGKTR QCGMHACART  660
CHPSSCDAPS GSGTSSRASC GQMCGAPRRD CRHTCIAPCH PSDSCPDVRC NFPVTITCSC  720
GRITANVPCD AGGSTSGFSG DFLYEASILQ KWPARLQPVE SNGTKIPLGQ RKLTCDDECA  780
KLERKRVLAD AFDITPPNLE ALHLGENAAL SELLSDLFRR DAKWVMSVEE RCKFLVLGKS  840
QGAASNMKVH VFCPMPKEKR DALRVIAERW KLAINTAGWE PKRFVVVHVT SRSKAPSRTL  900
GVKGSVSSNI LHPPVFDPLI DMDPRLVVSL LDLPRDADIS ALVLRFGGEC ELVWHNDKNA  960
LAVFHDPARA ATAMRRLDHG SVYHGAVTIQ SVGASPASSG ANPWGVGPKS NPWKKATLEE  1020
PCWGEEKEEN SWGGADGSSS STAAGGAKSA WQKKEDPIPS SINRWSVLGS EVGHSSSVVS  1080
VSAKQNGMES HSKSMMPAGQ LGGEPSGANA SEAVDDWEKA YE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein