PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0822s0027.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 166aa    MW: 19176.1 Da    PI: 11.0029
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0822s0027.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox22.91.5e-07991163855
                          TS-HHHHHHHHHHHHHHH CS
             Homeobox  38 gLterqVkvWFqNrRake 55 
                          +++ ++V++WFqN++a+e
  Kaladp0822s0027.1.p  99 KIEGKNVFYWFQNHKARE 116
                          89**************97 PP
2Wus_type_Homeobox49.88e-17921193764
    Wus_type_Homeobox  37 aeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                           +L++yGkie+kNVfyWFQN+kaRe qk
  Kaladp0822s0027.1.p  92 LQLRRYGKIEGKNVFYWFQNHKARECQK 119
                          58***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MHRGGFSRQQ PILSFNARKP RPLIPKPSTS TFPTHPNSFN QHAHCDTTNF FSTNHHISRI  60
NSCCSNLYSV VVSSSRWNPT PEQLRALEDR ALQLRRYGKI EGKNVFYWFQ NHKARECQKR  120
RRQQLENSSS SPKNDQQQTP HHHQNQQTKD QPAGNSHHQS SSTHN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.13e-23WOX family protein