PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0844s0025.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 230aa    MW: 24890.3 Da    PI: 9.162
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0844s0025.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.001163185123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++Cp C k++++   L  H r+H
  Kaladp0844s0025.1.p 163 HECPVCYKVYKSGQALGGHKRSH 185
                          79******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEEKHKCKLC ARRFGSGRAL GGHMRSHFTI LPVPPKTQPT SLIGTPSSSS EAKNPSQLED  60
SVVLDDESET ESKSLGPSGS RRVGKRSISE WRKLGAIKKS KSKKRSTEQA VSSVSETCSE  120
EDLAMCLMLL SRDKWVRKEC PVGRRNQIFL KNGTGGGGDV KIHECPVCYK VYKSGQALGG  180
HKRSHLFSST STAAAHSSDA DNVWLIDLNL PAPLEDGGDM SHNQIPVLC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.12e-32C2H2 family protein