PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0850s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 169aa    MW: 19025.7 Da    PI: 10.141
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0850s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3543.1e-17790694
                         ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                   B3  6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94
                         +++d ++++ l lp+kf++++g + ++   ++l+ ++  +W+v++  +k+s++++l+kGW +F+++ g++ g f+vF +d   + f  +v
  Kaladp0850s0001.1.p  7 ITADITTRSKLKLPRKFVKRYGANVPR--NVRLQVPTRAEWRVEV--KKNSDGVWLGKGWVKFAESLGIRYGHFLVFDYDVVhDVF--HV 90
                         5789999999***********888555..6***************..*******************************98653555..55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MKFFRIITAD ITTRSKLKLP RKFVKRYGAN VPRNVRLQVP TRAEWRVEVK KNSDGVWLGK  60
GWVKFAESLG IRYGHFLVFD YDVVHDVFHV LALDMSAVEI EYPTVSSIDD NEEEDLSGSR  120
FALKRPKVEH EDGDVVIVNK DGANLGNKRR AAGQAPSGEP ASKKATPSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.14e-14B3 family protein