PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0864s0008.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 219aa    MW: 24072.8 Da    PI: 6.9725
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0864s0008.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.41.4e-3971071100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                          +C aCk+lrrkC k+Cv+apyf++eq +++fa++hk+FGasnv+kll++lp ++r++a+ ++ yeA+ar++dPvyG++++i++lqqq+ +
  Kaladp0864s0008.1.p   7 PCGACKFLRRKCLKGCVFAPYFCHEQgASQFAAIHKVFGASNVSKLLAHLPVSDRSEAALTISYEAQARVHDPVYGCISHIFALQQQVVN 96 
                          7*************************89************************************************************** PP

               DUF260  90 lkaelallkee 100
                          l+a+la+lk++
  Kaladp0864s0008.1.p  97 LQAQLAYLKQQ 107
                          *******9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTGSSSPCGA CKFLRRKCLK GCVFAPYFCH EQGASQFAAI HKVFGASNVS KLLAHLPVSD  60
RSEAALTISY EAQARVHDPV YGCISHIFAL QQQVVNLQAQ LAYLKQQGGQ GQFNGTNSST  120
NPNWCHQLPG NNPILHHQNQ QTQVFNQTNL THLMNMASME SSENSISSRQ NQVVDPYSCS  180
YDETNSQTLD EIDERKWGFE DADDLRSVAF RGGGLCPK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.12e-51LBD family protein