PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0864s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 219aa MW: 24381.7 Da PI: 7.7123

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0864s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	125	3.8e-39	9	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkCa+dC++apyf+ +q p++fa++hk+FGasnv+kll ++p ++r da+ ++ yeA+ar+rdPvyG+v++i +lq+q+++ Kaladp0864s0009.1.p 9 PCGACKFLRRKCAPDCIFAPYFCPDQgPERFAAIHKVFGASNVSKLLLHVPVHDRGDAVLTVGYEAQARLRDPVYGCVAHIYALQKQVAC 98 7*******************999889********************************************************** PP DUF260 90 lkaelallkee 100 l+a+l +l+++ Kaladp0864s0009.1.p 99 LQAQLMQLRAQ 109 ***999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MASAAAGSPC GACKFLRRKC APDCIFAPYF CPDQGPERFA AIHKVFGASN VSKLLLHVPV 60 HDRGDAVLTV GYEAQARLRD PVYGCVAHIY ALQKQVACLQ AQLMQLRAQM THNNMIQGNK 120 PQNQQWTGTS NNTLSSSMVS RFLGDFETGY NINSSISPPS SIESTTSFDE DNRHNREAML 180 GMPEMWQRQE CAKRQRTSAY CHDEWSELQE LALKMMKD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42430.1	4e-48	LBD family protein