PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0878s0027.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 180aa    MW: 19248.1 Da    PI: 8.7656
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0878s0027.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.79.1e-39201191100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrr+Ca+ C+++pyf   +p+kf +vh++FGasnv+kll ++pe  r da+++lvyeA++r+rdPvyG++g i +lqqql +l
  Kaladp0878s0027.1.p  20 PCAACKLLRRRCAEACPFSPYFSPLEPHKFLAVHRVFGASNVSKLLLEAPEGLRADAANTLVYEANVRIRDPVYGCMGAIAALQQQLLSL 109
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          +a+l+++++e
  Kaladp0878s0027.1.p 110 QAQLDAVRAE 119
                          *****99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MTEKREQVLG PEVALNKVTP CAACKLLRRR CAEACPFSPY FSPLEPHKFL AVHRVFGASN  60
VSKLLLEAPE GLRADAANTL VYEANVRIRD PVYGCMGAIA ALQQQLLSLQ AQLDAVRAEI  120
LKHDVKISQA AAASSAPSIS SKNSTIALAA ISNNNISIQT ATTHHHQGDH HLMRSSSAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.12e-53LBD family protein