PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0912s0017.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 328aa    MW: 36833.2 Da    PI: 4.4874
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0912s0017.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72e-161865148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT +Ede+l + ++++G ++W++ +r  g+ R++k+c++rw +yl
  Kaladp0912s0017.1.p 18 KGPWTSDEDEILTNHINLHGHPNWRALPRLAGLARCGKSCRLRWTNYL 65
                         79********************************************97 PP
2Myb_DNA-binding50.64.5e-1671116148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T eE+e++++ +++lG++ W++Ia++++ gRt++++k+ w+++l
  Kaladp0912s0017.1.p  71 RGNFTREEEEIIIQSHQLLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 116
                          89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSKFSVEQYL SYLASLKKGP WTSDEDEILT NHINLHGHPN WRALPRLAGL ARCGKSCRLR  60
WTNYLQPGIK RGNFTREEEE IIIQSHQLLG NRWSAIAAKL PGRTDNEIKN VWHTHLKKKV  120
LKRNEPQGSA ATTDDSSNNS DFIIVDESIF HQAWDDHSRP SMDPINQHAH ADQTENNNPN  180
DAPACNTLYV PSFSPPQESY SEASYNNYNE VPSPEEFPET DETFWSDVLS SDFDNYSGSG  240
SSSMENCYPC YQQQPVSGFP FSSLVSDSNN VVNEMDPKEE TTAASNSFAS NVEANNVSGS  300
KTVVEDVDDF WFDVLFRAGE HPVLLDM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06180.13e-61MYB family protein