PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0926s0002.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 543aa    MW: 60540.5 Da    PI: 5.2212
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0926s0002.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS402.54.1e-1231735422374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                           +lLl cA+avs+gdl+ a al+  l +++s +gdp+qRl +y++e+L+arl  s+s +yk+l+++e +   sse +++++++++++P+ 
  Kaladp0926s0002.2.p 173 NQLLLCCAQAVSDGDLSTAGALMDVLDQRVSISGDPVQRLGTYMLEGLRARLEMSGSAIYKSLKCTEPT---SSEMMSYMHVLYQMCPYW 259
                          689*****************************************************************9...99**************** PP

                 GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
                          kf+++ aN aI eave+e ++Hi+Df+i qG QW+ Ll+aLa R++gpps+RiTgv++++s+  +   l+ +ge L+k+A+++++pf+f+
  Kaladp0926s0002.2.p 260 KFAYVSANTAIWEAVENEGKIHIVDFQIAQGSQWVDLLKALAIRQGGPPSVRITGVDDAQSTlaRGGGLHIVGEMLSKLAASCNIPFQFH 349
                          **********************************************************99999999************************ PP

                 GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                            ++++++ l  e+L + pgEal+ n+ + lh+++desvs+e++rde+L++vksl Pkv+++veqe+++n++ F++rf e+l+yy+a+f+
  Kaladp0926s0002.2.p 350 EATMSDVKVL-RENLVIVPGEALVFNFPYVLHHVPDESVSTENYRDELLRMVKSLAPKVLTLVEQESNTNTSAFVHRFKETLDYYTAMFE 438
                          *888888887.89***************************************************************************** PP

                 GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
                          s+++  +r++ +r + E ++++++i +++acegaer+erhe l+kWr+r++ aGF++ +ls  ++  +k +l+ ++ + +r+ee++g+l+
  Kaladp0926s0002.2.p 439 SMDVARSRDDAQRLNAEMHCVAKDIISMIACEGAERVERHELLAKWRARFNLAGFTQCTLSPAVTFYVKDMLKDFHTN-FRLEENKGALY 527
                          ****************************************************************************77.*********** PP

                 GRAS 360 lgWkdrpLvsvSaWr 374
                          l Wk+r++v++SaWr
  Kaladp0926s0002.2.p 528 LAWKNRAMVTCSAWR 542
                          **************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MQTSQQRHLS GNFHSLYQKA ADPHHAPRFQ ILDSNMSSDI GSKGADLSFK TCDEQFFTLE  60
SFSPTDHLFV PYESPPQTVA SILSNPSPYS SQGSQSYSSD PRYSPDNAYG TPVSVYSAAN  120
SSNELKYKLM EMENVLMAPD DTSEADSYYC NGSASSVPMW SQLKEIVPQL DINQLLLCCA  180
QAVSDGDLST AGALMDVLDQ RVSISGDPVQ RLGTYMLEGL RARLEMSGSA IYKSLKCTEP  240
TSSEMMSYMH VLYQMCPYWK FAYVSANTAI WEAVENEGKI HIVDFQIAQG SQWVDLLKAL  300
AIRQGGPPSV RITGVDDAQS TLARGGGLHI VGEMLSKLAA SCNIPFQFHE ATMSDVKVLR  360
ENLVIVPGEA LVFNFPYVLH HVPDESVSTE NYRDELLRMV KSLAPKVLTL VEQESNTNTS  420
AFVHRFKETL DYYTAMFESM DVARSRDDAQ RLNAEMHCVA KDIISMIACE GAERVERHEL  480
LAKWRARFNL AGFTQCTLSP AVTFYVKDML KDFHTNFRLE ENKGALYLAW KNRAMVTCSA  540
WR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein