PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0926s0003.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 350aa MW: 39504.3 Da PI: 6.5103

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0926s0003.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.2e-30	43	100	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkg efprsYY+Ct+++C+vkk +er++ d++++e++Y+g+H h+k Kaladp0926s0003.2.p 43 TDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLLERAH-DGRITEVIYKGTHSHPK 100 6*************************************9.*************85 PP
2	WRKY	103.2	1.5e-32	206	264	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+ +d k v++tYeg+Hnh+ Kaladp0926s0003.2.p 206 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERACHDIKSVITTYEGKHNHD 264 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MDSQQFEIQS QRIEGEKAMP SATVSPSDQN DVRSSSVSDN SSTDGYNWRK YGQKHVKGCE 60 FPRSYYKCTH PNCEVKKLLE RAHDGRITEV IYKGTHSHPK PQSKRRFSND AAMGMTDEHL 120 ERFSYQSEEM ALNSQVATPD MDGTSELPSG PPSDEELNDD KYDDDGDDPN SKRRKQDMGI 180 THFISSVKPI REPRVVVQTV SEVDILDDGY RWRKYGQKVV KGNPNPRSYY KCTNPGCPVR 240 KHVERACHDI KSVITTYEGK HNHDVPSAKA SNQEAAAVDP YSGYTSNIGS SMQQNDSVTR 300 VSDHYHQRPP DVRNQYHLED NEGENFRFAT PYLSSNAYPQ NLGSLLMGP*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MDSQQFEIQS QRIEGEKAMP SATVSPSDQN DVRSSSVSDN SSTDGYNWRK YGQKHVKGCE  60
FPRSYYKCTH PNCEVKKLLE RAHDGRITEV IYKGTHSHPK PQSKRRFSND AAMGMTDEHL  120
ERFSYQSEEM ALNSQVATPD MDGTSELPSG PPSDEELNDD KYDDDGDDPN SKRRKQDMGI  180
THFISSVKPI REPRVVVQTV SEVDILDDGY RWRKYGQKVV KGNPNPRSYY KCTNPGCPVR  240
KHVERACHDI KSVITTYEGK HNHDVPSAKA SNQEAAAVDP YSGYTSNIGS SMQQNDSVTR  300
VSDHYHQRPP DVRNQYHLED NEGENFRFAT PYLSSNAYPQ NLGSLLMGP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	5e-96	WRKY family protein