PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0964s0014.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 479aa MW: 52745.2 Da PI: 4.8005

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0964s0014.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed +l d+v+++G g+W+++ + g++R++k+c++rw ++l Kaladp0964s0014.1.p 31 KGQWTPAEDAILRDYVEKHGEGNWNAVQKFSGLTRCGKSCRLRWANHL 78 799*****************************************9986 PP
2	Myb_DNA-binding	50.6	4.3e-16	84	127	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE el ++++++lG++ W++ a++++ gRt++++k++w++ Kaladp0964s0014.1.p 84 RGAFTPEEVELVIKLHAKLGNK-WAKMAAELP-GRTDNEIKNFWNT 127 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MEWNVTDEIL ESPSGEDLAS GEGKSSGILT KGQWTPAEDA ILRDYVEKHG EGNWNAVQKF 60 SGLTRCGKSC RLRWANHLKP NLKRGAFTPE EVELVIKLHA KLGNKWAKMA AELPGRTDNE 120 IKNFWNTRIK RHQRSGLPIY PPEVCLKLAE ESQQSPHSAT FSIDLPSSHH FMEPSDFMIP 180 EFKIERPLNP SLFLDIPTSK EPPLGLGLVN TPNGLCDTAS RSLFENQIIH AHHLPELYSS 240 NSPLLCIPLG SHALTNGNLP TSAPGFGSVK LELPSLQSSE SDFIFWGAPA SPRPSFASKD 300 SVAPSPQVGP DLLQPAPDTD GLLESVVCPP NRLKTSNLDD LSLDPEWWEV LCDQPVTPMG 360 PSANGNSTDE LLSADVILGK LTHENHLHEV VSNIFFLVNQ VSLCLCDFHA GNEGKISDAD 420 PKQHLTSSNL NEIRDSCEWD PWRPDTWFNA ALLSPETEHA REYQRLQETI SAICGDDA*

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MEWNVTDEIL ESPSGEDLAS GEGKSSGILT KGQWTPAEDA ILRDYVEKHG EGNWNAVQKF  60
SGLTRCGKSC RLRWANHLKP NLKRGAFTPE EVELVIKLHA KLGNKWAKMA AELPGRTDNE  120
IKNFWNTRIK RHQRSGLPIY PPEVCLKLAE ESQQSPHSAT FSIDLPSSHH FMEPSDFMIP  180
EFKIERPLNP SLFLDIPTSK EPPLGLGLVN TPNGLCDTAS RSLFENQIIH AHHLPELYSS  240
NSPLLCIPLG SHALTNGNLP TSAPGFGSVK LELPSLQSSE SDFIFWGAPA SPRPSFASKD  300
SVAPSPQVGP DLLQPAPDTD GLLESVVCPP NRLKTSNLDD LSLDPEWWEV LCDQPVTPMG  360
PSANGNSTDE LLSADVILGK LTHENHLHEV VSNIFFLVNQ VSLCLCDFHA GNEGKISDAD  420
PKQHLTSSNL NEIRDSCEWD PWRPDTWFNA ALLSPETEHA REYQRLQETI SAICGDDA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	1e-69	MYB family protein