PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0964s0031.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 198aa    MW: 21590.3 Da    PI: 8.4996
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0964s0031.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY225.61.3e-6941716169
                YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesas.t 94 
                           se+vCyv+CnfC+t+lavsvP ts++++vtvrCGhC++lls n+    +  + ++  +++ +      l ++ +n++    +++s+s +
  Kaladp0964s0031.1.p   4 GSERVCYVHCNFCDTVLAVSVPCTSMLNIVTVRCGHCANLLSANMGALLEPCSIQDLPQKQQQTGAEGALVTNATNVNYSSGSSSSSSpS 93 
                          589*****************************************9999887777775444444443334444444444433333333212 PP

                YABBY  95 svssekl...senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                          + +++kl    e+++ + p+  p +rP ekrqrvPsaynrfikeeiqrika+nP+ishreafsaaaknWahfP+ihfg
  Kaladp0964s0031.1.p  94 KCNTNKLsgsCESSESDQPHRLPPVRPMEKRQRVPSAYNRFIKEEIQRIKAGNPEISHREAFSAAAKNWAHFPHIHFG 171
                          3333444555455566667767779****************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEVGSERVCY VHCNFCDTVL AVSVPCTSML NIVTVRCGHC ANLLSANMGA LLEPCSIQDL  60
PQKQQQTGAE GALVTNATNV NYSSGSSSSS SPSKCNTNKL SGSCESSESD QPHRLPPVRP  120
MEKRQRVPSA YNRFIKEEIQ RIKAGNPEIS HREAFSAAAK NWAHFPHIHF GMKKAKFVDQ  180
DQLASRDRSG QKSFGFN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.11e-64YABBY family protein