PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1016s0011.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 617aa MW: 67261.9 Da PI: 4.8624

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1016s0011.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.2	3.5e-33	206	262	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgsefprsYY+Ct+++C+++k+ver++ d++++ei+Y+g+Hnh+ Kaladp1016s0011.1.p 206 EDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCEMRKQVERTH-DGQITEIVYKGNHNHP 262 7*************************************9.*************8 PP
2	WRKY	104.4	6.1e-33	396	454	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC v+k+ver+ +d+k+v++tYeg+Hnhe Kaladp1016s0011.1.p 396 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTPGCLVRKHVERAPDDNKCVVTTYEGKHNHE 454 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MEPPDEYAAE EWNPAAAGSS SSSAPRMNPD PLIDPAVMMI PNSQPSPTTG SYYSPPFNQD 60 LSFLTNSMAA PTAAGGYCDS LPFFHGSEHP AGEVNNLHYF KHLETQDLDG GFLNLPSQQL 120 PIEFELPVLS NEFIASASIR NDYIDVDFLS PADLSNAHTT LPPSQPNDHI TSQRNDHMYI 180 DGAADHVMEE EKRASSPPMG GMRTTEDGYN WRKYGQKQVK GSEFPRSYYK CTHPNCEMRK 240 QVERTHDGQI TEIVYKGNHN HPQPMPNRRL TPDSAFAQNE MDAGEGCGGG TSRGKNEGLD 300 RALSEPILTE LSPTGREKRF SAFDSSEAAE LASPLHNHAA EDDEAVEENM ADANEVHNDA 360 TDLRRAEDCM VEPSMSSRGV REQKIVVEIE TEVDILDDGY RWRKYGQKVV KGNPNPRSYY 420 KCTTPGCLVR KHVERAPDDN KCVVTTYEGK HNHEVPAAKN SSNASPNAGH LSSAHPVGQP 480 SHMPLAGSAA ITMPAQAQFQ PPPFESKPYM GNGFSAHSLP GNFGNDVSFG ASSMYPMLYG 540 SFGLAASYPN IQRAGLSISR SPILDSAAAN PMTLHYGFDN HRGGGVIQTA HPGDENDPTR 600 RGPKQDEAND EPADDS*

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MEPPDEYAAE EWNPAAAGSS SSSAPRMNPD PLIDPAVMMI PNSQPSPTTG SYYSPPFNQD  60
LSFLTNSMAA PTAAGGYCDS LPFFHGSEHP AGEVNNLHYF KHLETQDLDG GFLNLPSQQL  120
PIEFELPVLS NEFIASASIR NDYIDVDFLS PADLSNAHTT LPPSQPNDHI TSQRNDHMYI  180
DGAADHVMEE EKRASSPPMG GMRTTEDGYN WRKYGQKQVK GSEFPRSYYK CTHPNCEMRK  240
QVERTHDGQI TEIVYKGNHN HPQPMPNRRL TPDSAFAQNE MDAGEGCGGG TSRGKNEGLD  300
RALSEPILTE LSPTGREKRF SAFDSSEAAE LASPLHNHAA EDDEAVEENM ADANEVHNDA  360
TDLRRAEDCM VEPSMSSRGV REQKIVVEIE TEVDILDDGY RWRKYGQKVV KGNPNPRSYY  420
KCTTPGCLVR KHVERAPDDN KCVVTTYEGK HNHEVPAAKN SSNASPNAGH LSSAHPVGQP  480
SHMPLAGSAA ITMPAQAQFQ PPPFESKPYM GNGFSAHSLP GNFGNDVSFG ASSMYPMLYG  540
SFGLAASYPN IQRAGLSISR SPILDSAAAN PMTLHYGFDN HRGGGVIQTA HPGDENDPTR  600
RGPKQDEAND EPADDS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-72	WRKY family protein