PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1016s0011.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 425aa MW: 47162.9 Da PI: 4.5023

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1016s0011.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.9	2.1e-33	206	262	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgsefprsYY+Ct+++C+++k+ver++ d++++ei+Y+g+Hnh+ Kaladp1016s0011.3.p 206 EDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCEMRKQVERTH-DGQITEIVYKGNHNHP 262 8*************************************9.*************8 PP
2	WRKY	22.1	2.9e-07	396	410	1	15
---SS-EEEEEEE-- CS WRKY 1 ldDgynWrKYGqKev 15 ldDgy+WrKYGqKe Kaladp1016s0011.3.p 396 LDDGYRWRKYGQKEL 410 59***********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MEPPDEYAAE EWNPAAAGSS SSSAPRMNPD PLIDPAVMMI PNSQPSPTTG SYYSPPFNQD 60 LSFLTNSMAA PTAAGGYCDS LPFFHGSEHP AGEVNNLHYF KHLETQDLDG GFLNLPSQQL 120 PIEFELPVLS NEFIASASIR NDYIDVDFLS PADLSNAHTT LPPSQPNDHI TSQRNDHMYI 180 DGAADHVMEE EKRASSPPMG GMRTTEDGYN WRKYGQKQVK GSEFPRSYYK CTHPNCEMRK 240 QVERTHDGQI TEIVYKGNHN HPQPMPNRRL TPDSAFAQNE MDAGEGCGGG TSRGKNEGLD 300 RALSEPILTE LSPTGREKRF SAFDSSEAAE LASPLHNHAA EDDEAVEENM ADANEVHNDA 360 TDLRRAEDCM VEPSMSSRGV REQKIVVEIE TEVDILDDGY RWRKYGQKEL LQMHHAWMLG 420 EKTC*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MEPPDEYAAE EWNPAAAGSS SSSAPRMNPD PLIDPAVMMI PNSQPSPTTG SYYSPPFNQD  60
LSFLTNSMAA PTAAGGYCDS LPFFHGSEHP AGEVNNLHYF KHLETQDLDG GFLNLPSQQL  120
PIEFELPVLS NEFIASASIR NDYIDVDFLS PADLSNAHTT LPPSQPNDHI TSQRNDHMYI  180
DGAADHVMEE EKRASSPPMG GMRTTEDGYN WRKYGQKQVK GSEFPRSYYK CTHPNCEMRK  240
QVERTHDGQI TEIVYKGNHN HPQPMPNRRL TPDSAFAQNE MDAGEGCGGG TSRGKNEGLD  300
RALSEPILTE LSPTGREKRF SAFDSSEAAE LASPLHNHAA EDDEAVEENM ADANEVHNDA  360
TDLRRAEDCM VEPSMSSRGV REQKIVVEIE TEVDILDDGY RWRKYGQKEL LQMHHAWMLG  420
EKTC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	9e-46	WRKY family protein