PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1117s0007.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 352aa    MW: 38101.1 Da    PI: 8.3384
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1117s0007.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.86.8e-12162186125
                          --S---SGGGGTS--TTTTT-SS-S CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaH 25 
                          y +  Cr +a+tG C+yG++C+F+H
  Kaladp1117s0007.1.p 162 YTMDVCRSWAETGSCQYGSNCQFSH 186
                          56789******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MENFYNNKIP MYPNRADMNS KMAGSPYTAW SGGYYNLHRM MTPPPLDPYA FDNRENIDPQ  60
LLMSWSCSSS SSGDNFSTPS AVNRPRYWGG YGNRSPLSLM ESFGKSTSSS ATRSPPVFAN  120
GALAMEEGVL VMDGVLVGNG HGGRQRSGKD SSGSSSSSVK SYTMDVCRSW AETGSCQYGS  180
NCQFSHRKED ANRARFSNKG KPELEVTFPR SPFSDSSLSI FRGQNSYSSP TMSSRGVVYG  240
RSPLGTGSAD GSRSSDSQTS RTELSPVIHS DWVPQDEGID VRPPGVENPT REEVLAYMNS  300
IMYGPRVRKR LPVFTSICPD SPPGSPSPTP PAPTHLPPIC PASNPRDSSF S*