PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1129s0026.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 276aa    MW: 29952 Da    PI: 7.5085
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1129s0026.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.97.2e-18123177256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ +++ +q   Lee F+++++++ ++++ LAk+lgL  rqV vWFqNrRa+ k
  Kaladp1129s0026.1.p 123 RKKLRLSVDQSILLEETFKEHSTLNPRQKQALAKQLGLRARQVEVWFQNRRARTK 177
                          677889999********************************************98 PP
2HD-ZIP_I/II113.91e-36123212191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rls +q+ lLEe+F+e+++L+p++K++la++Lgl++rqv+vWFqnrRARtk+kq+E ++e++kr++++l+++ +rL+kev+eLr +
  Kaladp1129s0026.1.p 123 RKKLRLSVDQSILLEETFKEHSTLNPRQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEAECEFMKRNCESLMDRVRRLTKEVHELR-A 211
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp1129s0026.1.p 212 L 212
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MSEVAALGNM VMMSSSEFGS GLDLNLSLNL GAPPHLPAVE PHSFSPNPVL SLAPALSLDK  60
KVVDLTKPPT SGDQGEDGGS PNSTWSTTLT GKRAHPEEEP NLVPGRESPP RGGSDEEDGE  120
NSRKKLRLSV DQSILLEETF KEHSTLNPRQ KQALAKQLGL RARQVEVWFQ NRRARTKLKQ  180
TEAECEFMKR NCESLMDRVR RLTKEVHELR ALKVAPQYYM QMPPATTLTL CPSCERVGIP  240
APPPAAAPFN GGRVAGPVPD NPWASGAGQM NLSLF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122128SRKKLRL
2172180RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.16e-72HD-ZIP family protein