PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1147s0001.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C3H

Protein Properties

Length: 426aa MW: 46451.3 Da PI: 6.5833

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1147s0001.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	18	5e-06	378	400	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C +f C +G++C++ H+ Kaladp1147s0001.1.p 378 KPCIYFNTARGCIHGANCSYQHD 400 69********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MRGSKTRRVS WATDANLCQV RLFLNDEAPS QVGLGIQDYL QAKTSSHLHP TSFEDNLPPG 60 FEGVQPTNLS NNLLLEVPTI KWKCPPKLIV DLTWHVAAGE ESQEVEAENH RGLRVLEAIY 120 PRPSSIPPNA VVSVDVKESQ NDYQQPPLIP ITPIEEEDVV VDLPYDPMQS KQIGSQGQVA 180 ASGGFSTPVY VGNNSASTSS SDRLFSVAAP GLEPGVLAAA SATYAAIMKT NQQGNLIDQE 240 LLVQILSDRN LAEKLVNGYG ASNLEAPQHN LPPANLANPP SAQNSRPELS KPAVPVSSSN 300 APLYLQPNKV LHPIVQGPPP VPVPPAKDIN YYKCLIQKHG EDRQEVPQQF GSRTNSQYAM 360 NQDHQRNNPH ASKPKIMKPC IYFNTARGCI HGANCSYQHD TSFQQRVNSM PDAKRMKMDR 420 EITGA*

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MRGSKTRRVS WATDANLCQV RLFLNDEAPS QVGLGIQDYL QAKTSSHLHP TSFEDNLPPG  60
FEGVQPTNLS NNLLLEVPTI KWKCPPKLIV DLTWHVAAGE ESQEVEAENH RGLRVLEAIY  120
PRPSSIPPNA VVSVDVKESQ NDYQQPPLIP ITPIEEEDVV VDLPYDPMQS KQIGSQGQVA  180
ASGGFSTPVY VGNNSASTSS SDRLFSVAAP GLEPGVLAAA SATYAAIMKT NQQGNLIDQE  240
LLVQILSDRN LAEKLVNGYG ASNLEAPQHN LPPANLANPP SAQNSRPELS KPAVPVSSSN  300
APLYLQPNKV LHPIVQGPPP VPVPPAKDIN YYKCLIQKHG EDRQEVPQQF GSRTNSQYAM  360
NQDHQRNNPH ASKPKIMKPC IYFNTARGCI HGANCSYQHD TSFQQRVNSM PDAKRMKMDR  420
EITGA*