PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp1222s0073.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 442aa MW: 48322.2 Da PI: 9.2125

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp1222s0073.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.8	1.7e-31	184	241	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgynWrKYGqK+vkgse+prsYY+Ct Cpv+kkvers +++++ei+Y+g+Hnhe Kaladp1222s0073.1.p 184 VDDGYNWRKYGQKQVKGSEYPRSYYKCTCFCCPVRKKVERSP-EGQIIEIIYKGQHNHE 241 59**************************************.*************8 PP
2	WRKY	105.8	2.2e-33	358	416	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+ +prsYY+Ct++gC+v+k+ver+++dpk v++tYeg+Hnh+ Kaladp1222s0073.1.p 358 LDDGFRWRKYGQKVVKGNSHPRSYYKCTTPGCNVRKHVERASTDPKSVITTYEGKHNHD 416 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MANAPVPSSH HHPRPATIAL PPRASAESFF ASGFPGFSPG TMTLVSSLFA ADDPRSFSQL 60 LAGAMASPAA PADKEDSMYK QKRPLNLEVS APPLFMVLPG ISPSGFLNSP GIFSPLQSPF 120 GMSHQQALAQ VIALAQSSMQ NQAGTGSYKP PSTLEPEIAS IAPSEVFHAG PKSQPPTAAS 180 DKPVDDGYNW RKYGQKQVKG SEYPRSYYKC TCFCCPVRKK VERSPEGQII EIIYKGQHNH 240 EQSPPKKSAK DGNDPIEDVR SQAMPDDNRL DKAEVPKRPT EAPPEQIVHE KDEKFRQETS 300 VDSRPLSTDE TRGNADSENG PMLKKRNSGS AVGEPNLPQK TVVEPKIVVQ TRSEVDLLDD 360 GFRWRKYGQK VVKGNSHPRS YYKCTTPGCN VRKHVERAST DPKSVITTYE GKHNHDMQKG 420 RSNGRQHIRQ SSPTEITDGG R*

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MANAPVPSSH HHPRPATIAL PPRASAESFF ASGFPGFSPG TMTLVSSLFA ADDPRSFSQL  60
LAGAMASPAA PADKEDSMYK QKRPLNLEVS APPLFMVLPG ISPSGFLNSP GIFSPLQSPF  120
GMSHQQALAQ VIALAQSSMQ NQAGTGSYKP PSTLEPEIAS IAPSEVFHAG PKSQPPTAAS  180
DKPVDDGYNW RKYGQKQVKG SEYPRSYYKC TCFCCPVRKK VERSPEGQII EIIYKGQHNH  240
EQSPPKKSAK DGNDPIEDVR SQAMPDDNRL DKAEVPKRPT EAPPEQIVHE KDEKFRQETS  300
VDSRPLSTDE TRGNADSENG PMLKKRNSGS AVGEPNLPQK TVVEPKIVVQ TRSEVDLLDD  360
GFRWRKYGQK VVKGNSHPRS YYKCTTPGCN VRKHVERAST DPKSVITTYE GKHNHDMQKG  420
RSNGRQHIRQ SSPTEITDGG R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-101	WRKY family protein