PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1246s0007.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 337aa    MW: 37221.5 Da    PI: 4.4233
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1246s0007.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.72.3e-1996148456
                          -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          +++++ +q++ Le+ Fe ++++  +++ +LAk+lgL+ rqV +WFqNrRa++k
  Kaladp1246s0007.1.p  96 KRRLSVDQVQFLERSFEAENKLEPDRKIQLAKELGLQPRQVAIWFQNRRARWK 148
                          568999**********************************************9 PP
2HD-ZIP_I/II130.47e-4295185292
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          kkrrls +qv++LE+sFe+e+kLep+rK +la+eLglqprqva+WFqnrRAR+ktkq+Ekdy+aL+++y++lk++ e+L +e+e+L++e+
  Kaladp1246s0007.1.p  95 KKRRLSVDQVQFLERSFEAENKLEPDRKIQLAKELGLQPRQVAIWFQNRRARWKTKQMEKDYDALQASYNSLKSSCEALVEENENLKAEV 184
                          9**************************************************************************************998 PP

          HD-ZIP_I/II  92 k 92 
                           
  Kaladp1246s0007.1.p 185 V 185
                          6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAAGGSRVFR SGNLTSCSES MAPVSNPPAT ASSSRHSDAL FLPGSSRFPG SGSAMVSFED  60
VNGSMGRNTR SFFTAFDQDD NGDEDYEEYL NQAGKKRRLS VDQVQFLERS FEAENKLEPD  120
RKIQLAKELG LQPRQVAIWF QNRRARWKTK QMEKDYDALQ ASYNSLKSSC EALVEENENL  180
KAEVVALSEK LASKENPSQN AEPSEASKQS AAVPDNPISN SASEEEDSKF PLVEQKLLDD  240
FTSAKSDIFQ SDSPRYADGV YSPHLEHVDS SYVFEPDNNS DLSQDEDDSL PKAYLPSSSY  300
MLPPLKHGDY PDLSATSSSN FGSAHGDHQP FWSWSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143151RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.12e-43HD-ZIP family protein