PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1246s0018.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 244aa    MW: 26574.2 Da    PI: 10.3388
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1246s0018.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.7e-1469113347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +W++eE+++++ + k+ G+g+W+ I++ + k+Rt+ q+ s+ qky
  Kaladp1246s0018.1.p  69 PWSEEEHKRFLMGLKKVGKGDWRGISKNFVKTRTPTQVASHAQKY 113
                          8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MATEGSKEIM LFGVRITVDS MRKTASMNNL SDYQHVAESG KGPEAEKPDG YVSDNGGRVG  60
VRERKRGTPW SEEEHKRFLM GLKKVGKGDW RGISKNFVKT RTPTQVASHA QKYFLRHSTV  120
KRRRRNSLFD ITTETVSGKP TEEQREATHG DSGSNSPTAD SSKAVVYPIV PSGPTQMPPP  180
LIAAPISFIY PPQVTQNPMM MILPAPPLAL QPVPLNLSLS LSSHSQTSTN PGLVSKDSYI  240
SVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19000.14e-41MYB_related family protein