PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1250s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 228aa    MW: 25861.5 Da    PI: 10.0003
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1250s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.53.9e-16129218198
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+k ++ps+v+   +l l  +f+++h  +  ++ ++tl de+ +++   +    ++ +  l++GWk+F+ a++L +gD +vF+l++ + f
  Kaladp1250s0002.1.p 129 FVKPMLPSHVSGGFWLGLNVSFCKRHLPN--RDSEVTLIDEDDEEYPTVY--LPRKTG--LSGGWKGFAVAHDLTDGDALVFQLIKPTAF 212
                          89************************533..5569***************..555544..************************997888 PP

                          ..EEEEE- CS
                   B3  91 elvvkvfr 98 
                            +v + r
  Kaladp1250s0002.1.p 213 --KVYITR 218
                          ..776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVQPEYEQSR QKRLEENRKR MEALNLPQLS QALRQFSPGL TTPPMKQRKP RAVEKKMVPV  60
RRSDRLSDKP GPVYLEVDVD RYDRVTIPRR VSKARDLSNQ VYASEEERSY SIKKAEEVQA  120
ALDATHPSFV KPMLPSHVSG GFWLGLNVSF CKRHLPNRDS EVTLIDEDDE EYPTVYLPRK  180
TGLSGGWKGF AVAHDLTDGD ALVFQLIKPT AFKVYITRAS GFKKTAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-76B3 family protein