PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1295s0017.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 342aa    MW: 36857 Da    PI: 8.3428
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1295s0017.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.94.2e-1293137347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+  ++ + ++lG+g+W+ I+rt    Rt+ q+ s+ qky
  Kaladp1295s0017.2.p  93 PWTEEEHRMFLLGLQKLGKGDWRGISRTYVISRTPTQVASHAQKY 137
                          7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGLIRKSAS MGNLSHCTGS TSGSNLNGGP  60
LGSGSPGDAP DHGDGYASED FASASREKKK GIPWTEEEHR MFLLGLQKLG KGDWRGISRT  120
YVISRTPTQV ASHAQKYFIR QSNVSRRKRR SSLFDIVADE SVEMPMETLQ ENHLNHQRHA  180
DSQSSYNLPT VPSPQVSAVP SPEEENESMD SATNSNDGDA SLPRPESTPI YYPVPVIVPA  240
YVSPVFPFSV PYWPGNRAAE LPETTKPHVV LKPTAVQPKS PINVDELLGM SKLSLGVESN  300
NEAGPSGPLS LKLSEGSSRQ SAFHANPAPG RSTSSNPIHA L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-111MYB_related family protein