PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1307s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BBR-BPC
Protein Properties Length: 304aa    MW: 33691.4 Da    PI: 10.6658
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1307s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind293.39.9e-90730331301
            GAGA_bind  31 siaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla......salpvgvqvlsgtksidslqql 114
                          ++++r++++rern+a++e k+a+aerd a l+rd+a+++r++a ++rdn +++l+++++s++      +++ +gv+v++g+k++++lqq+
  Kaladp1307s0001.1.p   7 VLSQRNDAVRERNMAIAEVKQAMAERDRAILERDAAVTDRDHARMQRDNVIAQLQHKTDSMNtsivihNQSESGVSVSQGAKQMQMLQQQ 96 
                          6789******************************************************99999999877778899999999*99999996 PP

            GAGA_bind 115 se.......pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader........... 186
                          ++       p+ ++ a++ re   ++++p ++aa+++++       +++k++ke k+ ++kk + k+ +k +k++++ +           
  Kaladp1307s0001.1.p  97 QQqqrrqhlPNYSEVAFNPREVPFSDVFPQSSAASKTTK------ARKGKRAKEAKTVSPKK-PLKPARKIAKKGTRASskqltatsqhs 179
                          663454444444444444455555555554444444444......44444444444444433.222333333332221123344556677 PP

            GAGA_bind 187 .........skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkk 267
                                    k+   + +l+ln+  lD+ +lPvP CsCtG+++ CYkWG GGWqSaCCtt++S+yPLP+++++r++R++grKmS+gaf+k
  Kaladp1307s0001.1.p 180 sddgtsgnlDKQIVLKGGLSLNELGLDDVNLPVPFCSCTGKPQSCYKWGKGGWQSACCTTALSMYPLPQMPNKRHSRMGGRKMSGGAFTK 269
                          8899987776666777899*********************************************************************** PP

            GAGA_bind 268 lLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                          l+ +La+eGyd+  p+DLk+hWAkHGtn+++ ir
  Kaladp1307s0001.1.p 270 LITRLASEGYDITVPIDLKNHWAKHGTNRYIIIR 303
                          ********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDPYFAVLSQ RNDAVRERNM AIAEVKQAMA ERDRAILERD AAVTDRDHAR MQRDNVIAQL  60
QHKTDSMNTS IVIHNQSESG VSVSQGAKQM QMLQQQQQQQ RRQHLPNYSE VAFNPREVPF  120
SDVFPQSSAA SKTTKARKGK RAKEAKTVSP KKPLKPARKI AKKGTRASSK QLTATSQHSS  180
DDGTSGNLDK QIVLKGGLSL NELGLDDVNL PVPFCSCTGK PQSCYKWGKG GWQSACCTTA  240
LSMYPLPQMP NKRHSRMGGR KMSGGAFTKL ITRLASEGYD ITVPIDLKNH WAKHGTNRYI  300
IIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-73BBR-BPC family protein