PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp1322s0006.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YC
Protein Properties Length: 142aa    MW: 15308.7 Da    PI: 9.7659
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp1322s0006.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC45.12.3e-1412921998
                NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98
                          ++P  r+kki+k d+d++++ aea  l+s + ++f+  l+ rs   a e+kr+ +k   + +a +r   + dfl+d  p 
  Kaladp1322s0006.1.p 12 PSFPTGRVKKIMKIDKDINKVNAEALHLISCSTDVFLQFLAERSAAVATEKKRKIVKLEHLRTAAKRHLpTSDFLLDSLPA 92
                         589**********************************************************99998864389*****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MAENDSDDPI TPSFPTGRVK KIMKIDKDIN KVNAEALHLI SCSTDVFLQF LAERSAAVAT  60
EKKRKIVKLE HLRTAAKRHL PTSDFLLDSL PAPQSLPVVD GPAAEIRARP AEVKPAPAGT  120
RRIDQIFAKS GKEAAGSIIE T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.16e-33NF-YC family protein