PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH80283.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

MYB

Protein Properties

Length: 226aa MW: 25725.5 Da PI: 6.6092

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH80283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.2	3.4e-07	24	67	3	44
SS-HHHHHHHHHH...HHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvda...vkqlGggtWktIartmgkgRtlkqcksrw 44 WT e+ +l+ +a v ++ +++W+ Ia+ ++ g+++ ++k+ + MCH80283.1 24 QWTREDVKLFEKAlvsVSEHSSNRWEEIAEQVP-GKSAAEVKDQY 67 6**********6666788888******.******988 PP
2	Myb_DNA-binding	46.5	8.6e-15	114	159	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE++l++ + k++ g Wk+I+r+ +Rt+ q+ s+ qky MCH80283.1 114 KPWTEEEHKLFLAGLKEYKEGEWKLISRYYVVTRTPTQVASHAQKY 159 58*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MHQKTIDMAA AAAAKTLWPT QPTQWTREDV KLFEKALVSV SEHSSNRWEE IAEQVPGKSA 60 AEVKDQYDDL VHDXLEIESG RVEVPNYPDD LDVNSGGGMS RHGDNEKQKK RKGKPWTEEE 120 HKLFLAGLKE YKEGEWKLIS RYYVVTRTPT QVASHAQKYF LRKNEANKER KRPSIHDITL 180 EDSNSAPAPI DRNCVPPPGV GSLHQSQGMY YFPSNSMQDQ MGSQMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	5e-58	MYB family protein