PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH80459.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 256aa    MW: 29051.5 Da    PI: 9.2837
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH80459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.81.6e-261412234128
         NAM  34 ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.............tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkg 116
                 i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+               + +W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+
  MCH80459.1  14 IEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqteecdlqgtssGGETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKP 110
                 555537**********.555666799******************8789999988854433567************.999***********554799999 PP

         NAM 117 ektdWvmheyrl 128
                 ekt+Wvmh+y+l
  MCH80459.1 111 EKTNWVMHQYHL 122
                 9*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MKSHPLIDEF ILTIEGEDGI CYTHPEKLPG VTRDGLSRHF FHRPSKAYTT GTRKRRKIQT  60
EECDLQGTSS GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP EKTNWVMHQY  120
HLGQHEEEKE GELVVSKIFY QTQPRQCNWS DNNNHRIGAT ATITGEGSGG GEANNNYGRR  180
DSGSGSTSSK EIVTHNHSHG HIHRDEMSAV VGVNPLTSFT NALDIQHLKS DHFGLLPFRK  240
STFDEVRYIY YLELTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-101NAC family protein