PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH80617.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 131aa    MW: 14134.4 Da    PI: 8.136
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH80617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.8e-184277134
        GATA  1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34
                C++Cgt++  Tp++Rrgp+g+++LCnaCGly++ +g
  MCH80617.1 42 CTHCGTSSksTPMMRRGPSGPRSLCNACGLYWANRG 77
                ********************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MSKCRMQRNK GQFTSSKKQD GANGWGTDQD SGQDDSQSET SCTHCGTSSK STPMMRRGPS  60
GPRSLCNACG LYWANRGALR DLSKRHHELS IVPAEQVDQG NSSDCGTATI PSHNNLAAFS  120
ENNNQALVAD R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.22e-39GATA family protein