PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH80757.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

G2-like

Protein Properties

Length: 358aa MW: 40758.5 Da PI: 6.0575

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH80757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	75.9	5.4e-24	47	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ +LH++Fv+av+++ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl MCH80757.1 47 KARVIWSVDLHQKFVKAVNRI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 100 68*****************.9*****************************8 PP
2	Myb_DNA-binding	36.5	1.1e-11	51	99	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W+ ++++++v+av++ G + +k+I m+ +t++++ s++qky+ MCH80757.1 51 IWSVDLHQKFVKAVNRIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 99 5***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MRNGSNHTDD DSNLFAVGGE MNLMKKRKDL DNKHDDKEFG DQTSIKKARV IWSVDLHQKF 60 VKAVNRIGFD KVGPKKILDL MNVPWLTREN VASHLQKYRL YLSRLQKKND QKSSTGLSFL 120 NSLNKQQNDG AIDNFRYSDG TLKLHMDTTS HEVDLNGTVT RPTIEKIRAS ISDITDPKIR 180 KSSQIGCNQP FESAESEANH TVYEYSPVST QCSWNEVPKR LLKKEQNTQK HFQIDQPLSM 240 NSNPSDYKSD YVSPVNSMVS EIDTFPSQSK SLIANDQSPD IVFTSSLSSK APGYNLGCIS 300 DMEIYQRNLL LDSHAASTPL DEYYNMNFGM QNMEMSEYYD PWLIAEVPTN LYDSADYS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MRNGSNHTDD DSNLFAVGGE MNLMKKRKDL DNKHDDKEFG DQTSIKKARV IWSVDLHQKF  60
VKAVNRIGFD KVGPKKILDL MNVPWLTREN VASHLQKYRL YLSRLQKKND QKSSTGLSFL  120
NSLNKQQNDG AIDNFRYSDG TLKLHMDTTS HEVDLNGTVT RPTIEKIRAS ISDITDPKIR  180
KSSQIGCNQP FESAESEANH TVYEYSPVST QCSWNEVPKR LLKKEQNTQK HFQIDQPLSM  240
NSNPSDYKSD YVSPVNSMVS EIDTFPSQSK SLIANDQSPD IVFTSSLSSK APGYNLGCIS  300
DMEIYQRNLL LDSHAASTPL DEYYNMNFGM QNMEMSEYYD PWLIAEVPTN LYDSADYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	2e-33	ARR-B family protein