PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH80950.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 66aa    MW: 7829.93 Da    PI: 4.6657
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH80950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26029.42.3e-0924755100
      DUF260  55 edamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                 ++a++slvye ear+r+P +G + ++++l++ l+++++e++ +k+e
  MCH80950.1   2 RKAVDSLVYEVEARLRNPTNGFLDFVHNLENWLKEVQQEIDNVKSE 47 
                 5799************************************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    
MRKAVDSLVY EVEARLRNPT NGFLDFVHNL ENWLKEVQQE IDNVKSELTK YLNLEVIQFV  60
MNNLGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.16e-10LBD family protein