PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH81032.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 109aa    MW: 12776.9 Da    PI: 4.6513
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH81032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.4e-071151446
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     W+ e d  + +a + ++ + W+  a+++  g++l+++k ++ +
       MCH81032.1 11 WSREQDIAFENALANHPEE-WEQFAAYVT-GKSLEEIKRHYVD 51
                     *******************.********9.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MDELGNSSCY WSREQDIAFE NALANHPEEW EQFAAYVTGK SLEEIKRHYV DLIDDVNHIE  60
SGYVPLPDYN EIRAVKKGTE TSRTVQERRK GIPWTEAEHR XVSLSLLWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.19e-27MYB family protein