PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH81196.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 196aa    MW: 21373.3 Da    PI: 9.6536
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH81196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.1e-103579554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                h+++Er RR+ri +++  L++l+P+ +      K + a++L + v+Y+k L
  MCH81196.1 35 HSIAERLRRERIAERIRALQDLVPSvN------KTDRAAMLDEIVDYVKFL 79
                99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
VFHGQPMHTN VPAAPHPPAM RPRVRARRGQ ATDPHSIAER LRRERIAERI RALQDLVPSV  60
NKTDRAAMLD EIVDYVKFLR LQVKVLSMSR LGGAGAVAPL VTDIPLSSVE QSNKSSGGDQ  120
EEGSEGGRNR PAWDKWSNDG TEKQVAKLME ENVGAAMQLL QSKALCIMPI SLASAIYQSQ  180
PPDSSSIVKP ETNPPP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14045RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-74bHLH family protein