PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH81367.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family AP2
Protein Properties Length: 237aa    MW: 27184.6 Da    PI: 5.1539
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH81367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.51.9e-09109160155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV+ +k  grW+A+   +   gk+  ++ g f+ + +Aa+a+++a+ k +g
  MCH81367.1 109 SKYRGVTLHK-CGRWEARMGQF--LGKKYIVYHGLFDGELDAARAYDKAAIKCNG 160
                 89********.7******5443..3367999*******99**********99776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
IEQNHLPLRF SSFXFFLFVI QQLDVSEMLV VAQILSGCST DSRFFKLFDL VLLVEVELNL  60
RAYDRAVIKF RGVVADINFN VCDYDEDIKQ EEFVHILRRQ STDFSRGSSK YRGVTLHKCG  120
RWEARMGQFL GKKYIVYHGL FDGELDAARA YDKAAIKCNG REAVTNFEAS TYEGELISQC  180
DNEDSNQNLD LNLAIAPPSN SDVQMMNMQH NGSGLQVQRS WDDMPDDKSV MVRFKKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.39e-60AP2 family protein